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| Ano de publicação | Título | Autor(es) |
| 2008 | Electrostatic potential at the alpha carbon atoms along the alpha helices and beta strands. | MAZONI, I.  ; JARDINE, J. G.; BORRO, L. C.; ALVARENGA, D.; NESHICH, G. |
| 2007 | Electrostatic potential calculation for biomolecules - creating a database of pré-calculated values reported on a per residue basis for all PDB protein structures. | ROCCHIA, W.; NESHICH, G. |
| 2007 | Finding protein-protein interaction patterns by contact map matching. | MELO, R. C.; RIBEIRO, C.; MURRAY, C. S.; VELOSO, C. J. M.; SILVEIRA, C. H. da; NESHICH, G.; MEIRA JUNIOR, W.; CARCERONI, R. L.; SANTORO, M. M. |
| 2013 | Identification of new Sphingomyelinases D in pathogenic fungi and other pathogenic organisms. | DIAS-LOPES, C.; NESHICH, I. A. P.; NESHICH, G.; ORTEGA, J. M.; GRANIER, C.; CHÁVEZ-OLORTEGUI, C.; MOLINA, F.; FELICORI, L. |
| 2015 | Identification of snake bradykinin-potentiating peptides (BPPs)-simile sequences in rat brain: potential BPP-like precursor protein? | CAMPEIRO, J. D'A.; NESHICH, I. P.; SANT'ANNA, O. A.; LOPES, R.; IANZER, D.; ASSAKURA, M. T.; NESHICH, G.; HAYASHI, M. A. F. |
| 2015 | Improving binding affinity prediction by using a rule-based model with physical-chemical and structural descriptors of the nano-environment for protein-ligand interactions. | BORRO, L. C.; SALIM, J. A.; MAZONI, I.; YANO, I.; JARDINE, J. G.; NESHICH, G. |
| 2014 | Improving predictions of protein-protein interfaces by combining amino acid-specific classifiers based on structural and physicochemical descriptors with their weighted neighbor averages. | MORAES, F. R. de; NESHICH, I. A. P.; MAZONI, I.; YANO, I. H.; PEREIRA, J. G. C.; SALIM, J. A.; JARDINE, J. G.; NESHICH, G. |
| 2015 | Induction of neutralizing antibodies against mutalysin-II from Lachesis muta muta Snake Venom Elicited by a conformational B-cell epitope predicted by Blue Star Sting data base. | MACHADO-DE-ÁVILA, R. A.; VELLOSO, M.; OLIVEIRA, D.; STRANSKY, S.; FLOR-SÁ, A.; SCHNEIDER, F. S.; NESHICH, G.; CHÁVEZ-OLÓRTEGUI, C. |
| 2000 | Interações moleculares entre alpha-amilases e inibidores de plantas. | DA SILVA, M. C. M.; NESHICH, G.; TOGAWA, R. C.; MELLO, L. V.; CHRISPEELS, M.; GROSSI-de-SÁ, M. F. |
| 2009 | Large scale protein function prediction tools. | MINARDI, R. C. de M.; ARTIGUENAVE, F.; NESHICH, G. |
| 2011 | Milho: manobra de escape. | BRANDÃO, M.; ARRUDA, L.; MOURA, D.; SILVA FILHO, M.; SILVA, F. H. da; MALAGÓ JÚNIOR, W.; NESHICH, I.; NESHICH, G. |
| 2007 | Mining structural signatures in proteins using intrachain interactions. | MELO, R. C.; GOMIDE, J. S.; MEIRA JUNIOR, W.; LOPES, J. C. D.; NESHICH, G.; SANTORO, M. M. |
| 2006 | Molecular homologous modeling of 3B-HSD2 mutant enzyme: structure-function aspects of Pro222GLN mutation correlates with the experimental data from a patient with congenital adrenal hyperplasia. | FERRAZ, L. F. C.; SOARDI, F.; FALCÃO, P.; NESHICH, G.; MELLO, M. P. de |
| 2007 | Molecular modeling and structural analysis of the Myelin basic protein-Q65ZS4. | JARDINE, J. G.; NESHICH, G.; MAZONI, I.; MARTINS, D.; MARANGONI, S.; NOVELLO, J. C.; GATTAZ, W. F.; DIAS-NETO, E. |
| 2006 | Molecular modeling of polypetide deformylase from acidithiobacillus ferrooxidans. | REIS, F. de C.; CALDAS, L. F.; SANTOS, M. T. dos; FALCÃO, P. R. K.; NESHICH, G.; OTTOBONI, L. M. M. |
| 2006 | Molecular modeling of the riboflavin genes from acidithiobacillus ferrooxidans. | FERRAZ, L. F. C.; REIS, F. de C.; SANTOS, M. T.; FELÍCIO, A. P.; FALCÃO, P. R. K.; NOVO, M. T. M.; NESHICH, G.; GARCIA JUNIOR, O.; OTTOBONI, L. M. M. |
| 2006 | MSSP: simultaneous comparison of the same structure descriptor for different protein structures. | MAZONI, I.; KUSER, P.; YAMAGISHI, M.; BORRO, L.; JARDINE, J.; SANTOS, E. H. dos; OLIVEIRA, S. R. de M.; NESHICH, G. |
| 2010 | Multiple Structures - Selected Parameter (MSSP) 2D Plot. | NESHICH, G. |
| 2004 | Mutants of common bean alpha-amylase inhibitor-2 as an approach to investigate binding specificity to alpha-amylases. | SILVA, M. C. M. da; MELLO, L. V.; COUTINHO, M. V.; RIGDEN, D. J.; NESHICH, G.; CHRISPEELS, M. J.; GROSSI-DE-SÁ, M. F. |
| 2006 | PDB-Metrics: a web tool for exploring the PDB contents. | FILETO, R.; KUSER, P. R.; YAMAGISHI, M. E. B.; RIBEIRO, A. A.; QUINALIA, T. G.; FRANCO, E. H.; MANCINI, A. L.; HIGA, R. H.; OLIVEIRA, S. R. M.; SANTOS, E. H.; VIEIRA, F. D.; MAZONI, I.; CRUZ, S. A. B.; NESHICH, G. |
