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Título: Is a genome a codeword of an error-correcting code?
Autor: FARIA, L. C. B.
ROCHA, A. S. L.
KLEINSCHMIDT, J. H.
SILVA-FILHO, M. C.
BIM, E.
HERAI, R. H.
YAMAGISHI, M. E. B.
PALAZZO JÚNIOR, R.
Afiliación: LUZINETE C. B. FARIA, Unicamp; ANDRÉA S. L. ROCHA, Unicamp; JOÃO H. KLEINSCHMIDT, UFABC; MÁRCIO C. SILVA-FILHO, Esalq/USP; EDSON BIM, Unicamp; ROBERTO H. HERAI, University of California San Diego; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; REGINALDO PALAZZO JÚNIOR, Unicamp.
Año: 2012
Referencia: PLoS ONE, San Francisco, v. 7, n. 5, p. 1-9, May 2012.
Descripción: Since a genome is a discrete sequence, the elements of which belong to a set of four letters, the question as to whether or not there is an error-correcting code underlying DNA sequences is unavoidable. The most common approach to answering this question is to propose a methodology to verify the existence of such a code. However, none of the methodologies proposed so far, although quite clever, has achieved that goal. In a recent work, we showed that DNA sequences can be identified as codewords in a class of cyclic error-correcting codes known as Hamming codes. In this paper, we show that a complete intron-exon gene, and even a plasmid genome, can be identified as a Hamming code codeword as well. Although this does not constitute a definitive proof that there is an error-correcting code underlying DNA sequences, it is the first evidence in this direction.
Thesagro: Biologia
NAL Thesaurus: Genome
Nucleotide sequences
Palabras clave: Sequência de DNA
Biology
Tipo de Material: Artigo de periódico
Acceso: openAccess
Aparece en las colecciones:Artigo em periódico indexado (CNPTIA)

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