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dc.contributor.authorBOASCARIOL-CAMARGO, R. L.
dc.contributor.authorBERGER, I. J.
dc.contributor.authorSOUZA, A. A.
dc.contributor.authorAMARAL, A. M. do
dc.contributor.authorCARLOS, E. F.
dc.contributor.authorFREITAS-ÁSTUA, J.
dc.contributor.authorTAKITA, M. A.
dc.contributor.authorTARGON, M. L. P. N.
dc.contributor.authorMEDINA, C. L.
dc.contributor.authorREIS, M. S.
dc.contributor.authorMACHADO, M. A.
dc.date.accessioned2026-08-13T21:33:34Z-
dc.date.available2026-08-13T21:33:34Z-
dc.date.created2008-02-12
dc.date.issued2007
dc.identifier.citationGenetics and Molecular Biology, Ribeirão Preto, v. 30, n. 3, p. 906-916, 2007.
dc.identifier.issn1415-4757
dc.identifier.urihttp://www.alice.cnptia.embrapa.br/alice/handle/doc/654648-
dc.descriptionCitEST project resulted in the construction of cDNA libraries from different Citrus sp. tissues under various physiological conditions. Among them, plantlets of Rangpur lime were exposed to hydroponic conditions with and without water stress using PEG6000. RNA from roots was obtained and generated a total of 4,130 valid cDNA reads, with 2,020 from the non-stressed condition and 2,110 from the stressed set. Bioinformatic analyses measured the frequency of each read in the libraries and yielded an in silico transcriptional profile for each condition. A total of 40 contigs were differentially expressed and allowed to detect up-regulated homologue sequences to well known genes involved in stress response, such as aquaporins, dehydrin, sucrose synthase, and proline-related synthase. Some sequences could not be classified by using FunCat and remained with an unknown function. A large number of sequences presented high similarities to annotated genes involved with cell energy, protein synthesis and cellular transport, suggesting that Rangpur lime may sustain active cell growth under stressed condition. The presence of membrane transporters and cell signaling components could be an indication of a coordinated morphological adaptation and biochemical response during drought, helping to explain the higher tolerance of this rootstock to water stress.
dc.language.isoeng
dc.rightsopenAccess
dc.subjectTranscription
dc.subjectRootstock
dc.subjectMolecular response
dc.titleIn silico analysis of ESTs from roots of Rangpur lime (Citrus limonia Osbeck) under water stress.
dc.typeArtigo de periódico
dc.subject.nalthesaurusDrought
dc.subject.nalthesaurusExpressed sequence tags
riaa.ainfo.id654648
riaa.ainfo.lastupdate2023-10-20
dc.contributor.institutionRaquel L. Boscariol-Camargo, APTA; Irving J. Berger, APTA; Alessandra A. Souza, APTA; Alexandre M. do Amaral, CENARGEN; Eduardo F. Carlos, APTA; Juliana Freitas-Astúa, CNPMF; Marco A. Takita, APTA; Maria Luisa P.N. Targon, APTA; Camilo L. Medina, Grupo de Consultores em Citros; Marcelo S. Reis, APTA; Marcos A. Machado, APTA.
Aparece en las colecciones:Artigo em periódico indexado (CNPMF)

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