Please use this identifier to cite or link to this item: http://www.alice.cnptia.embrapa.br/alice/handle/doc/8264
Research center of Embrapa/Collection: Embrapa Informática Agropecuária - Artigo em periódico indexado (ALICE)
Date Issued: 2006
Type of Material: Artigo em periódico indexado (ALICE)
Authors: FILETO, R.
KUSER, P. R.
YAMAGISHI, M. E. B.
RIBEIRO, A. A.
QUINALIA, T. G.
FRANCO, E. H.
MANCINI, A. L.
HIGA, R. H.
OLIVEIRA, S. R. M.
SANTOS, E. H.
VIEIRA, F. D.
MAZONI, I.
CRUZ, S. A. B.
NESHICH, G.
Additional Information: RENATO FILETO; PAULA REGINA KUSER FALCAO, CNPTIA; MICHEL EDUARDO BELEZA YAMAGISHI, CNPTIA; ANDRÉ A. RIBEIRO; THIAGO G. QUINALIA; EDUARDO H. FRANCO; ADAUTO LUIZ MANCINI, CNPTIA; ROBERTO HIROSHI HIGA, CNPTIA; STANLEY ROBSON DE MEDEIROS OLIVEIRA, CNPTIA; EDGARD HENRIQUE DOS SANTOS, CNPTIA; FABIO DANILO VIEIRA, CNPTIA; IVAN MAZONI, CNPTIA; SERGIO APARECIDO BRAGA DA CRUZ, CNPTIA; GORAN NESHICH, CNPTIA.
Title: PDB-Metrics: a web tool for exploring the PDB contents.
Publisher: Genetics and Molecular Research, v. 5, n. 2, p. 333-341, 2006.
Language: en
Keywords: Bioinformática
Banco de dados de proteína
PDB data distribution statistics
Protein Data Bank
Description: Abstract. PDB-Metrics (http://sms.cbi.cnptia.embrapa.br/SMS/pdb_metrics/index.html) is a component of the Diamond STING suite of programs for the analysis of protein sequence, structure and function. It summarizes the characteristics of the collection of protein structure descriptions deposited in the Protein Data Bank (PDB) and provides a Web interface to search and browse the PDB, using a variety of alternative criteria. PDB-Metrics is a powerful tool for bioinformaticians to examine the data span in the PDB from several perspectives. Although other Web sites offer some similar resources to explore the PDB contents, PDB-Metrics is among those with the most complete set of such facilities, integrated into a single Web site. This program has been developed using SQLite, a C library that provides all the query facilities of a database management system.
NAL Thesaurus: Bioinformatics
Proteins
Data Created: 2007-03-09
Appears in Collections:Artigo em periódico indexado (CNPTIA)

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