Please use this identifier to cite or link to this item: http://www.alice.cnptia.embrapa.br/alice/handle/doc/1009575
Title: Descriptive analysis of copy number variation regions in a population of dairy Gyr cattle.
Authors: SILVA, M. V. G. B.
OLIVEIRA JUNIOR, G.
REY, F. S. B.
GIACHETTO, P. F.
MACHADO, M. A.
VERNEQUE, R. da S.
FERRAZ, J. B. S.
Affiliation: MARCOS VINICIUS GUALBERTO B SILVA, CNPGL; MARCO ANTONIO MACHADO, CNPGL; RUI DA SILVA VERNEQUE, CNPGL.
Date Issued: 2014
Citation: In: WORLD CONGRESS OF GENETICS APPLIED TO LIVESTOCK PRODUCTION, 10., 2014, Vancouver. Proceedings... Champaign: American Society of Animal Science, 2014.
Pages: 3 p.
Description: The aim of this work was to investigate, based on a high density BovineHD SNP array, the abundance and distributions of CNVs and CNVR in a Gyr cattle population from Brazil. Genotype data of representative bulls were recorded, totaling 476 Gyr animals. For CNV identification was used the PennCNV software and the CNVRs were determined by the CNVRuler software. A total of 26,672 CNVs were found, beingon average 62 CNV per animal. Also, 1,898 CNVRs were detected on the autosomal chromosomes. Also, 1,898 CNVRs were detected on the autosomal chromosomes with 96% of these between 1.1 Kb to 100 Kb. The Ensembl's VEP tool, using the CNVRs information as input, found 913 coding regions, suggesting that exon regions were duplicated. In summary, the results help to better understand the Gyr genome and suggest that CNVRs might have some relationship with production traits.
Thesagro: Bos indicus
Gado de corte
Gado Zebu
Bovino.
NAL Thesaurus: cattle
dairy cattle
genomics
single nucleotide polymorphism.
Keywords: Polimorfismo de nucleotídeo único.
Language: en
Type of Material: Anais e Proceedings de eventos
Access: openAccess
Appears in Collections:Artigo em anais de congresso (CNPGL)

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