Title:	Coexpression and transcriptome analyses identify active apomixis-related genes in Paspalum notatum leaves.
Authors:	OLIVEIRA, F. A. de VIGNA, B. B. Z. SILVA, C. C. da FAVERO, A. P. MATTA, F. de P. AZEVEDO, A. L. S. SOUZA, A. P. de
Affiliation:	Fernanda A. de Oliveira, UNICAMP; BIANCA BACCILI ZANOTTO VIGNA, CPPSE; Carla C. da Silva, UNICAMP; ALESSANDRA PEREIRA FAVERO, CPPSE; FREDERICO DE PINA MATTA, CPPSE; ANA LUISA SOUSA AZEVEDO, CNPGL; Anete P. de Souza, UNICAMP.
Date Issued:	2020
Citation:	BMC Genomics, v. 21, n. 78, 2020.
Pages:	15 p.
Description:	RNA sequencing (RNA-seq) is the most effective method for simultaneously predicting new transcripts and identifying differentially expressed genes among distinct tissues, genotypes, abiotic conditions and developmental stages [1]. Conversely, considering the large amount of data generated from RNA-seq, new approaches that efficiently extract meaningful associations from highly multivariate datasets are needed [2]. Transcriptome coexpression studies can show how complex phenotypes depend on the activity of coordinated batteries of genes [3]. Therefore, the construction of coexpression networks based on gene expression data using correlation metrics provides valuable information regarding alterations in biological systems in response to differential gene expression patterns [2, 4].
NAL Thesaurus:	Apomixis Paspalum
Keywords:	Differential expression Gene coexpression network RNA sequencing
DOI:	https://doi.org/10.1186/s12864-020-6518-z
Type of Material:	Artigo de periódico
Access:	openAccess
Appears in Collections:	Artigo em periódico indexado (CPPSE)